Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 LSM12P1-201ENST00000411836 588 ntBASIC17.12■□□□□ 0.33
SETD9Q8NE22 TUBB8P6-201ENST00000436895 1288 ntBASIC17.12■□□□□ 0.33
SETD9Q8NE22 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 DUX4L16-201ENST00000555130 1264 ntBASIC17.12■□□□□ 0.33
SETD9Q8NE22 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 AL499627.1-201ENST00000569373 2188 ntBASIC17.12■□□□□ 0.33
SETD9Q8NE22 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.12■□□□□ 0.33
SETD9Q8NE22 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SETD9Q8NE22 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 AC099398.1-201ENST00000567919 2776 ntBASIC17.11■□□□□ 0.33
SETD9Q8NE22 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SETD9Q8NE22 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SETD9Q8NE22 FLJ13224-201ENST00000313737 1514 ntBASIC17.11■□□□□ 0.33
SETD9Q8NE22 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 OR6D1P-203ENST00000641209 4860 ntBASIC17.1■□□□□ 0.33
SETD9Q8NE22 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 MTMR9LP-203ENST00000426597 1545 ntBASIC17.1■□□□□ 0.33
SETD9Q8NE22 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SETD9Q8NE22 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SETD9Q8NE22 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms