Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 RPS2P55-201ENST00000397318 883 ntBASIC18.24■□□□□ 0.51
CPSF7Q8N684 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 AC107956.1-201ENST00000494359 873 ntBASIC18.24■□□□□ 0.51
CPSF7Q8N684 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CPSF7Q8N684 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPSF7Q8N684 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 AC012618.2-201ENST00000428058 849 ntBASIC18.23■□□□□ 0.51
CPSF7Q8N684 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 AC233702.5-201ENST00000584107 538 ntBASIC18.23■□□□□ 0.51
CPSF7Q8N684 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.23■□□□□ 0.51
CPSF7Q8N684 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPSF7Q8N684 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.22■□□□□ 0.51
CPSF7Q8N684 AL121829.2-201ENST00000620908 328 ntBASIC18.22■□□□□ 0.51
CPSF7Q8N684 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.22■□□□□ 0.51
CPSF7Q8N684 HEIH-201ENST00000623091 1652 ntBASIC18.22■□□□□ 0.51
CPSF7Q8N684 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPSF7Q8N684 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 464.4 ms