Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 SPDYE15P-201ENST00000424157 909 ntBASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 KRT18P38-201ENST00000449496 1282 ntBASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 HOMER2P1-201ENST00000455653 964 ntBASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 AC092647.4-201ENST00000457211 535 ntBASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
C9orf40Q8IXQ3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 AC010240.3-201ENST00000607688 395 ntBASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C9orf40Q8IXQ3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms