Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC28.3■■■□□ 2.12
CD109Q6YHK3 RNA5SP416-201ENST00000516838 111 ntBASIC28.3■■■□□ 2.12
CD109Q6YHK3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC28.3■■■□□ 2.12
CD109Q6YHK3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CD109Q6YHK3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC28.3■■■□□ 2.12
CD109Q6YHK3 TEX21P-204ENST00000641479 1693 ntBASIC28.3■■■□□ 2.12
CD109Q6YHK3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CD109Q6YHK3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CD109Q6YHK3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CD109Q6YHK3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CD109Q6YHK3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CD109Q6YHK3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CD109Q6YHK3 KRT18P28-201ENST00000453838 1332 ntBASIC28.28■■■□□ 2.12
CD109Q6YHK3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CD109Q6YHK3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC28.28■■■□□ 2.12
CD109Q6YHK3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CD109Q6YHK3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CD109Q6YHK3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CD109Q6YHK3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC28.28■■■□□ 2.12
CD109Q6YHK3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CD109Q6YHK3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 UNC93B6-202ENST00000528242 690 ntBASIC28.27■■■□□ 2.12
CD109Q6YHK3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CD109Q6YHK3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CD109Q6YHK3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CD109Q6YHK3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC28.27■■■□□ 2.12
CD109Q6YHK3 AC007967.2-201ENST00000432613 625 ntBASIC28.26■■■□□ 2.12
CD109Q6YHK3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC28.26■■■□□ 2.12
CD109Q6YHK3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC28.26■■■□□ 2.12
CD109Q6YHK3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC28.26■■■□□ 2.12
CD109Q6YHK3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CD109Q6YHK3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CD109Q6YHK3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CD109Q6YHK3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CD109Q6YHK3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CD109Q6YHK3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CD109Q6YHK3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC28.26■■■□□ 2.11
CD109Q6YHK3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CD109Q6YHK3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 AC211486.1-202ENST00000416371 468 ntBASIC28.25■■■□□ 2.11
CD109Q6YHK3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 AC211476.1-201ENST00000503899 468 ntBASIC28.25■■■□□ 2.11
CD109Q6YHK3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC28.25■■■□□ 2.11
CD109Q6YHK3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CD109Q6YHK3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CD109Q6YHK3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 AC009533.2-201ENST00000543664 586 ntBASIC28.24■■■□□ 2.11
CD109Q6YHK3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 AC011467.2-201ENST00000598425 242 ntBASIC28.24■■■□□ 2.11
CD109Q6YHK3 AL138831.2-201ENST00000606564 490 ntBASIC28.24■■■□□ 2.11
CD109Q6YHK3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CD109Q6YHK3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CD109Q6YHK3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.23■■■□□ 2.11
CD109Q6YHK3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC28.23■■■□□ 2.11
CD109Q6YHK3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms