Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 KRT18P22-201ENST00000402024 1347 ntBASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 HMGA1P5-201ENST00000412453 271 ntBASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 AC012306.2-201ENST00000609350 630 ntBASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 AC133561.5-201ENST00000635547 218 ntBASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 MYC-208ENST00000641036 567 ntBASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 MYLKP1-201ENST00000509077 1580 ntBASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PTPN20Q4JDL3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN20Q4JDL3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 AIRN-201ENST00000601203 4374 ntBASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN20Q4JDL3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms