Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 MRPL3P1-201ENST00000400109 1033 ntBASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 AL121912.1-201ENST00000603683 238 ntBASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTC1Q2NKJ3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 RNF126P1-202ENST00000569893 925 ntBASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 BX640515.1-201ENST00000617215 977 ntBASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 AC139530.3-201ENST00000620344 690 ntBASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 AL391807.1-203ENST00000604392 2365 ntBASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.91■□□□□ 0.78
CTC1Q2NKJ3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 TOB2P1-201ENST00000469761 992 ntBASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 AC079776.4-201ENST00000511039 504 ntBASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 AL136038.4-201ENST00000603606 1261 ntBASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 AC117500.6-201ENST00000624871 588 ntBASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 HLA-A-201ENST00000376802 1334 ntBASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.9■□□□□ 0.78
CTC1Q2NKJ3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CTC1Q2NKJ3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms