Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC141257.4-201ENST00000634557 245 ntBASIC16.88■□□□□ 0.29
SUMO3P55854 AC136944.6-201ENST00000634818 245 ntBASIC16.88■□□□□ 0.29
SUMO3P55854 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.88■□□□□ 0.29
SUMO3P55854 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.87■□□□□ 0.29
SUMO3P55854 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.87■□□□□ 0.29
SUMO3P55854 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
SUMO3P55854 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.87■□□□□ 0.29
SUMO3P55854 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SUMO3P55854 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
SUMO3P55854 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.87■□□□□ 0.29
SUMO3P55854 AL137013.1-201ENST00000432946 1228 ntBASIC16.87■□□□□ 0.29
SUMO3P55854 AC104390.1-201ENST00000555663 520 ntBASIC16.87■□□□□ 0.29
SUMO3P55854 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.87■□□□□ 0.29
SUMO3P55854 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.87■□□□□ 0.29
SUMO3P55854 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SUMO3P55854 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.87■□□□□ 0.29
SUMO3P55854 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SUMO3P55854 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SUMO3P55854 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 WIZP1-201ENST00000531444 2299 ntBASIC16.86■□□□□ 0.29
SUMO3P55854 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 TERF1P1-201ENST00000311003 1181 ntBASIC16.86■□□□□ 0.29
SUMO3P55854 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SUMO3P55854 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SUMO3P55854 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.86■□□□□ 0.29
SUMO3P55854 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.86■□□□□ 0.29
SUMO3P55854 AL031432.5-201ENST00000641059 760 ntBASIC16.86■□□□□ 0.29
SUMO3P55854 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SUMO3P55854 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.86■□□□□ 0.29
SUMO3P55854 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SUMO3P55854 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SUMO3P55854 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.85■□□□□ 0.29
SUMO3P55854 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.85■□□□□ 0.29
SUMO3P55854 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 AC010203.1-204ENST00000548782 407 ntBASIC16.85■□□□□ 0.29
SUMO3P55854 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.85■□□□□ 0.29
SUMO3P55854 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.85■□□□□ 0.29
SUMO3P55854 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.85■□□□□ 0.29
SUMO3P55854 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms