Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CDH11P55287 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH11P55287 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH11P55287 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDH11P55287 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDH11P55287 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH11P55287 AL353807.1-201ENST00000427475 662 ntBASIC17.1■□□□□ 0.33
CDH11P55287 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.1■□□□□ 0.33
CDH11P55287 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH11P55287 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH11P55287 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH11P55287 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH11P55287 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH11P55287 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDH11P55287 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH11P55287 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CDH11P55287 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 TUBB8P6-201ENST00000436895 1288 ntBASIC17.09■□□□□ 0.33
CDH11P55287 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 KRT18P16-201ENST00000510337 1294 ntBASIC17.09■□□□□ 0.33
CDH11P55287 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH11P55287 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH11P55287 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH11P55287 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDH11P55287 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH11P55287 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH11P55287 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH11P55287 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH11P55287 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH11P55287 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDH11P55287 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH11P55287 ABALON-201ENST00000629058 1903 ntBASIC17.08■□□□□ 0.33
CDH11P55287 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDH11P55287 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDH11P55287 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDH11P55287 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDH11P55287 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms