Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2JP52435 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
POLR2JP52435 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR2JP52435 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 AL357033.4-201ENST00000617703 1807 ntBASIC17.86■□□□□ 0.45
POLR2JP52435 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
POLR2JP52435 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 KRT17P3-201ENST00000420566 1262 ntBASIC17.86■□□□□ 0.45
POLR2JP52435 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2JP52435 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2JP52435 PRSS44-201ENST00000515154 1146 ntBASIC17.86■□□□□ 0.45
POLR2JP52435 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.86■□□□□ 0.45
POLR2JP52435 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.86■□□□□ 0.45
POLR2JP52435 AC104771.1-201ENST00000603335 964 ntBASIC17.86■□□□□ 0.45
POLR2JP52435 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 KRT8P45-201ENST00000414328 1447 ntBASIC17.86■□□□□ 0.45
POLR2JP52435 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
POLR2JP52435 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.86■□□□□ 0.45
POLR2JP52435 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2JP52435 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
POLR2JP52435 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
POLR2JP52435 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.86■□□□□ 0.45
POLR2JP52435 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2JP52435 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
POLR2JP52435 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
POLR2JP52435 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
POLR2JP52435 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.85■□□□□ 0.45
POLR2JP52435 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.85■□□□□ 0.45
POLR2JP52435 AC069544.1-201ENST00000609399 999 ntBASIC17.85■□□□□ 0.45
POLR2JP52435 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2JP52435 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
POLR2JP52435 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
POLR2JP52435 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
POLR2JP52435 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR2JP52435 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR2JP52435 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR2JP52435 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR2JP52435 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
POLR2JP52435 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR2JP52435 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR2JP52435 KRT16P5-201ENST00000455284 522 ntBASIC17.84■□□□□ 0.45
POLR2JP52435 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR2JP52435 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 AP003097.1-201ENST00000530657 1135 ntBASIC17.84■□□□□ 0.45
POLR2JP52435 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR2JP52435 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
POLR2JP52435 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2JP52435 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR2JP52435 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms