Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.59■□□□□ 0.573e-6■■□□□ 12.6
NCBP2P52298 GPS2-207ENST00000571697 1977 ntTSL 218.34■□□□□ 0.533e-6■■□□□ 12.6
NCBP2P52298 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.57e-9■■□□□ 12.6
NCBP2P52298 SHROOM1-204ENST00000440118 1080 ntTSL 218.18■□□□□ 0.53e-6■■□□□ 12.6
NCBP2P52298 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.53e-6■■□□□ 12.6
NCBP2P52298 TMEM256-PLSCR3-202ENST00000570600 1526 ntAPPRIS ALT2 TSL 218.13■□□□□ 0.497e-9■■□□□ 12.6
NCBP2P52298 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.05■□□□□ 0.483e-6■■□□□ 12.6
NCBP2P52298 CEP350-210ENST00000491495 1059 ntTSL 518.03■□□□□ 0.487e-9■■□□□ 12.6
NCBP2P52298 NR1H3-209ENST00000436778 802 ntTSL 317.45■□□□□ 0.383e-6■■□□□ 12.6
NCBP2P52298 DUT-206ENST00000558978 1171 ntTSL 317.37■□□□□ 0.373e-6■■□□□ 12.6
NCBP2P52298 STAU2-208ENST00000520872 560 ntTSL 317.26■□□□□ 0.353e-6■■□□□ 12.6
NCBP2P52298 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.23■□□□□ 0.353e-6■■□□□ 12.6
NCBP2P52298 AC026954.2-201ENST00000315601 2349 ntAPPRIS ALT2 TSL 217.16■□□□□ 0.343e-6■■□□□ 12.6
NCBP2P52298 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.77■□□□□ 0.273e-6■■□□□ 12.6
NCBP2P52298 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.243e-6■■□□□ 12.6
NCBP2P52298 DUT-204ENST00000558472 724 ntTSL 316.29■□□□□ 0.23e-6■■□□□ 12.6
NCBP2P52298 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.16■□□□□ 0.181e-11■■□□□ 12.6
NCBP2P52298 PLSCR1-208ENST00000472349 1198 ntTSL 516.13■□□□□ 0.173e-6■■□□□ 12.6
NCBP2P52298 TMEM256-PLSCR3-201ENST00000570569 562 ntAPPRIS P5 TSL 315.58■□□□□ 0.087e-9■■□□□ 12.6
NCBP2P52298 NR1H3-229ENST00000527464 1183 ntTSL 1 (best)15.52■□□□□ 0.083e-6■■□□□ 12.6
NCBP2P52298 NR1H3-233ENST00000531660 667 ntTSL 315.52■□□□□ 0.083e-6■■□□□ 12.6
NCBP2P52298 NR1H3-226ENST00000495866 569 ntTSL 415.52■□□□□ 0.083e-6■■□□□ 12.6
NCBP2P52298 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.47■□□□□ 0.073e-6■■□□□ 12.6
NCBP2P52298 CSNK1D-205ENST00000403276 1040 ntTSL 215.38■□□□□ 0.051e-11■■□□□ 12.6
NCBP2P52298 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.033e-6■■□□□ 12.6
NCBP2P52298 CSNK1D-223ENST00000584472 586 ntTSL 414.87□□□□□ -0.031e-11■■□□□ 12.6
NCBP2P52298 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.84□□□□□ -0.033e-6■■□□□ 12.6
NCBP2P52298 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.073e-6■■□□□ 12.6
NCBP2P52298 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.56□□□□□ -0.083e-6■■□□□ 12.6
NCBP2P52298 CSNK1D-217ENST00000581241 6094 ntTSL 214.24□□□□□ -0.131e-11■■□□□ 12.6
NCBP2P52298 GPS2-211ENST00000573059 829 ntTSL 314.21□□□□□ -0.133e-6■■□□□ 12.6
NCBP2P52298 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.04□□□□□ -0.163e-6■■□□□ 12.6
NCBP2P52298 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.78□□□□□ -0.21e-11■■□□□ 12.6
NCBP2P52298 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.213e-6■■□□□ 12.6
NCBP2P52298 GPS2-209ENST00000572363 1143 ntTSL 513.63□□□□□ -0.233e-6■■□□□ 12.6
NCBP2P52298 NR1H3-234ENST00000532630 549 ntTSL 313.52□□□□□ -0.253e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-205ENST00000468985 983 ntTSL 513.51□□□□□ -0.253e-6■■□□□ 12.6
NCBP2P52298 GPS2-214ENST00000574201 550 ntTSL 213.5□□□□□ -0.253e-6■■□□□ 12.6
NCBP2P52298 NR1H3-231ENST00000529540 1673 ntTSL 213.47□□□□□ -0.253e-6■■□□□ 12.6
NCBP2P52298 STAU2-204ENST00000518767 1146 ntTSL 1 (best)13.46□□□□□ -0.253e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.263e-6■■□□□ 12.6
NCBP2P52298 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.261e-11■■□□□ 12.6
NCBP2P52298 NR1H3-220ENST00000481020 1704 ntTSL 513.37□□□□□ -0.273e-6■■□□□ 12.6
NCBP2P52298 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.37□□□□□ -0.273e-6■■□□□ 12.6
NCBP2P52298 IFNAR1-202ENST00000442071 491 ntTSL 313.28□□□□□ -0.283e-6■■□□□ 12.6
NCBP2P52298 GPS2-216ENST00000577040 916 ntTSL 513.06□□□□□ -0.323e-6■■□□□ 12.6
NCBP2P52298 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.01□□□□□ -0.331e-11■■□□□ 12.6
NCBP2P52298 IFNAR1-203ENST00000493503 250 ntTSL 512.98□□□□□ -0.333e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-206ENST00000469266 1257 ntTSL 1 (best)12.9□□□□□ -0.343e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-203ENST00000442255 1994 ntTSL 512.83□□□□□ -0.363e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.363e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-205ENST00000486267 675 ntTSL 212.7□□□□□ -0.383e-6■■□□□ 12.6
NCBP2P52298 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.67□□□□□ -0.383e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-204ENST00000463777 701 ntTSL 312.39□□□□□ -0.433e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-216ENST00000489775 984 ntTSL 512.34□□□□□ -0.433e-6■■□□□ 12.6
NCBP2P52298 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.447e-9■■□□□ 12.6
NCBP2P52298 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.463e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-215ENST00000488253 581 ntTSL 312.16□□□□□ -0.463e-6■■□□□ 12.6
NCBP2P52298 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.11□□□□□ -0.473e-6■■□□□ 12.6
NCBP2P52298 CSNK1D-211ENST00000579316 692 ntTSL 212.05□□□□□ -0.481e-11■■□□□ 12.6
NCBP2P52298 CSNK1D-219ENST00000581660 611 ntTSL 512.05□□□□□ -0.481e-11■■□□□ 12.6
NCBP2P52298 CSNK1D-213ENST00000580446 612 ntTSL 312.01□□□□□ -0.491e-11■■□□□ 12.6
NCBP2P52298 ZNF169-205ENST00000492115 396 ntTSL 211.93□□□□□ -0.53e-6■■□□□ 12.6
NCBP2P52298 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.513e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-203ENST00000462666 862 ntTSL 511.79□□□□□ -0.523e-6■■□□□ 12.6
NCBP2P52298 NR1H3-224ENST00000487913 852 ntTSL 211.69□□□□□ -0.543e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.563e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-204ENST00000452581 960 ntTSL 1 (best)11.45□□□□□ -0.583e-6■■□□□ 12.6
NCBP2P52298 DCTN6-202ENST00000519830 540 ntTSL 511.26□□□□□ -0.613e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-209ENST00000477974 415 ntTSL 311.15□□□□□ -0.623e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-219ENST00000494568 817 ntTSL 211.15□□□□□ -0.623e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.653e-6■■□□□ 12.6
NCBP2P52298 PIK3R4-201ENST00000356763 5015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.653e-6■■□□□ 12.6
NCBP2P52298 GPS2-202ENST00000389167 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.653e-6■■□□□ 12.6
NCBP2P52298 PLSCR1-213ENST00000486631 701 ntTSL 510.93□□□□□ -0.663e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.663e-6■■□□□ 12.6
NCBP2P52298 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.673e-6■■□□□ 12.6
NCBP2P52298 ZMYM1-206ENST00000466390 508 ntTSL 310.57□□□□□ -0.723e-6■■□□□ 12.6
NCBP2P52298 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.727e-9■■□□□ 12.6
NCBP2P52298 STAU2-228ENST00000524191 808 ntTSL 310.17□□□□□ -0.783e-6■■□□□ 12.6
NCBP2P52298 DCTN6-205ENST00000522540 578 ntTSL 310.03□□□□□ -0.83e-6■■□□□ 12.6
NCBP2P52298 GTSE1-201ENST00000454366 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.813e-6■■□□□ 12.6
NCBP2P52298 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC9.98□□□□□ -0.813e-6■■□□□ 12.6
NCBP2P52298 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC9.67□□□□□ -0.863e-6■■□□□ 12.6
NCBP2P52298 CSNK1D-226ENST00000585026 563 ntTSL 59.59□□□□□ -0.871e-11■■□□□ 12.6
NCBP2P52298 CSNK1D-210ENST00000579308 598 ntTSL 29.56□□□□□ -0.881e-11■■□□□ 12.6
NCBP2P52298 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.53□□□□□ -0.883e-6■■□□□ 12.6
NCBP2P52298 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC9.5□□□□□ -0.893e-6■■□□□ 12.6
NCBP2P52298 STAU2-203ENST00000518502 687 ntTSL 39.5□□□□□ -0.893e-6■■□□□ 12.6
NCBP2P52298 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC9.14□□□□□ -0.953e-6■■□□□ 12.6
NCBP2P52298 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.953e-6■■□□□ 12.6
NCBP2P52298 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.983e-6■■□□□ 12.6
NCBP2P52298 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC8.94□□□□□ -0.983e-6■■□□□ 12.6
NCBP2P52298 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.023e-6■■□□□ 12.6
NCBP2P52298 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.133e-6■■□□□ 12.6
NCBP2P52298 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.153e-6■■□□□ 12.6
NCBP2P52298 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.75□□□□□ -1.177e-9■■□□□ 12.6
NCBP2P52298 NDUFAF4-203ENST00000489477 624 ntTSL 37.58□□□□□ -1.23e-6■■□□□ 12.6
NCBP2P52298 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.45□□□□□ -1.223e-6■■□□□ 12.6
NCBP2P52298 DCTN6-204ENST00000522141 820 ntTSL 36.49□□□□□ -1.373e-6■■□□□ 12.6
Retrieved 100 of 18,329 protein–RNA pairs in 205.5 ms