Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLCSP50747 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.84■□□□□ 0.45
HLCSP50747 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLCSP50747 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.84■□□□□ 0.45
HLCSP50747 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLCSP50747 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
HLCSP50747 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 RCC2P6-201ENST00000526625 1557 ntBASIC17.83■□□□□ 0.45
HLCSP50747 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.83■□□□□ 0.45
HLCSP50747 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HLCSP50747 KRT8P9-201ENST00000558927 1449 ntBASIC17.83■□□□□ 0.45
HLCSP50747 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLCSP50747 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HLCSP50747 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HLCSP50747 AL390955.1-201ENST00000428694 934 ntBASIC17.83■□□□□ 0.44
HLCSP50747 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.83■□□□□ 0.44
HLCSP50747 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.83■□□□□ 0.44
HLCSP50747 NAPSB-206ENST00000562112 1266 ntBASIC17.83■□□□□ 0.44
HLCSP50747 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.83■□□□□ 0.44
HLCSP50747 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.83■□□□□ 0.44
HLCSP50747 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HLCSP50747 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HLCSP50747 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.83■□□□□ 0.44
HLCSP50747 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLCSP50747 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HLCSP50747 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.82■□□□□ 0.44
HLCSP50747 FP475955.4-201ENST00000623131 1990 ntBASIC17.82■□□□□ 0.44
HLCSP50747 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.82■□□□□ 0.44
HLCSP50747 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
HLCSP50747 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 AC004951.3-201ENST00000418645 1148 ntBASIC17.82■□□□□ 0.44
HLCSP50747 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.82■□□□□ 0.44
HLCSP50747 FAM210CP-201ENST00000445714 574 ntBASIC17.82■□□□□ 0.44
HLCSP50747 AP005242.2-201ENST00000580065 1175 ntBASIC17.82■□□□□ 0.44
HLCSP50747 AC145285.6-201ENST00000604632 637 ntBASIC17.82■□□□□ 0.44
HLCSP50747 AC011298.2-201ENST00000617989 482 ntBASIC17.82■□□□□ 0.44
HLCSP50747 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.82■□□□□ 0.44
HLCSP50747 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HLCSP50747 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HLCSP50747 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 AC067852.2-201ENST00000590513 2313 ntBASIC17.82■□□□□ 0.44
HLCSP50747 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HLCSP50747 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLCSP50747 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLCSP50747 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HLCSP50747 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.81■□□□□ 0.44
HLCSP50747 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.81■□□□□ 0.44
HLCSP50747 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.81■□□□□ 0.44
HLCSP50747 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.81■□□□□ 0.44
HLCSP50747 AC097488.1-201ENST00000507834 756 ntBASIC17.81■□□□□ 0.44
HLCSP50747 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.81■□□□□ 0.44
HLCSP50747 AL160286.2-201ENST00000567150 934 ntBASIC17.81■□□□□ 0.44
HLCSP50747 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.81■□□□□ 0.44
HLCSP50747 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.81■□□□□ 0.44
HLCSP50747 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.81■□□□□ 0.44
HLCSP50747 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLCSP50747 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.81■□□□□ 0.44
HLCSP50747 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.81■□□□□ 0.44
HLCSP50747 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms