Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX5P45973 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX5P45973 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 AL596257.1-201ENST00000641463 2694 ntBASIC16.07■□□□□ 0.16
CBX5P45973 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 AC006015.1-201ENST00000429970 570 ntBASIC16.06■□□□□ 0.16
CBX5P45973 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 AC005181.1-201ENST00000604782 1256 ntBASIC16.06■□□□□ 0.16
CBX5P45973 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX5P45973 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX5P45973 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX5P45973 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CBX5P45973 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CBX5P45973 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.05■□□□□ 0.16
CBX5P45973 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
CBX5P45973 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.05■□□□□ 0.16
CBX5P45973 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CBX5P45973 TSPY21P-201ENST00000433481 731 ntBASIC16.05■□□□□ 0.16
CBX5P45973 RPS2P52-201ENST00000469610 820 ntBASIC16.05■□□□□ 0.16
CBX5P45973 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.05■□□□□ 0.16
CBX5P45973 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.05■□□□□ 0.16
CBX5P45973 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.05■□□□□ 0.16
CBX5P45973 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
CBX5P45973 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CBX5P45973 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.05■□□□□ 0.16
CBX5P45973 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.05■□□□□ 0.16
CBX5P45973 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.05■□□□□ 0.16
CBX5P45973 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX5P45973 AC068880.1-201ENST00000507289 2297 ntBASIC16.05■□□□□ 0.16
CBX5P45973 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms