Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.74■□□□□ 0.27
SOX6P35712 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SOX6P35712 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SOX6P35712 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SOX6P35712 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SOX6P35712 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
SOX6P35712 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX6P35712 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.73■□□□□ 0.27
SOX6P35712 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SOX6P35712 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 AC023632.3-201ENST00000521633 145 ntBASIC16.73■□□□□ 0.27
SOX6P35712 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SOX6P35712 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SOX6P35712 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.73■□□□□ 0.27
SOX6P35712 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SOX6P35712 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX6P35712 AC116351.2-201ENST00000606540 1585 ntBASIC16.72■□□□□ 0.27
SOX6P35712 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX6P35712 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SOX6P35712 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SOX6P35712 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.72■□□□□ 0.27
SOX6P35712 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX6P35712 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SOX6P35712 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SOX6P35712 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX6P35712 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX6P35712 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX6P35712 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SOX6P35712 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX6P35712 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.71■□□□□ 0.27
SOX6P35712 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SOX6P35712 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX6P35712 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX6P35712 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SOX6P35712 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
SOX6P35712 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
SOX6P35712 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SOX6P35712 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
SOX6P35712 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SOX6P35712 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms