Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.33■□□□□ 0.53
VARSP26640 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.33■□□□□ 0.52
VARSP26640 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
VARSP26640 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.33■□□□□ 0.52
VARSP26640 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.33■□□□□ 0.52
VARSP26640 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.33■□□□□ 0.52
VARSP26640 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.33■□□□□ 0.52
VARSP26640 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
VARSP26640 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VARSP26640 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
VARSP26640 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.32■□□□□ 0.52
VARSP26640 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.32■□□□□ 0.52
VARSP26640 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
VARSP26640 WIZP1-201ENST00000531444 2299 ntBASIC18.32■□□□□ 0.52
VARSP26640 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VARSP26640 FAM207BP-201ENST00000447172 505 ntBASIC18.32■□□□□ 0.52
VARSP26640 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
VARSP26640 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.32■□□□□ 0.52
VARSP26640 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.32■□□□□ 0.52
VARSP26640 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 AC145285.6-201ENST00000604632 637 ntBASIC18.32■□□□□ 0.52
VARSP26640 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.32■□□□□ 0.52
VARSP26640 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VARSP26640 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VARSP26640 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VARSP26640 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VARSP26640 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VARSP26640 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.31■□□□□ 0.52
VARSP26640 AC020763.4-201ENST00000623414 4170 ntBASIC18.31■□□□□ 0.52
VARSP26640 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.31■□□□□ 0.52
VARSP26640 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
VARSP26640 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 TSPY15P-201ENST00000457163 923 ntBASIC18.31■□□□□ 0.52
VARSP26640 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.31■□□□□ 0.52
VARSP26640 NUDT16P1-203ENST00000513809 620 ntBASIC18.31■□□□□ 0.52
VARSP26640 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.31■□□□□ 0.52
VARSP26640 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.31■□□□□ 0.52
VARSP26640 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.31■□□□□ 0.52
VARSP26640 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
VARSP26640 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VARSP26640 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 AL512353.2-201ENST00000448759 1962 ntBASIC18.3■□□□□ 0.52
VARSP26640 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.3■□□□□ 0.52
VARSP26640 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.3■□□□□ 0.52
VARSP26640 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
VARSP26640 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.3■□□□□ 0.52
VARSP26640 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 FSCN1P1-201ENST00000568912 1481 ntBASIC18.3■□□□□ 0.52
VARSP26640 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms