Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CAPN3P20807 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 AC233702.5-201ENST00000584107 538 ntBASIC17.97■□□□□ 0.47
CAPN3P20807 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
CAPN3P20807 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN3P20807 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN3P20807 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CAPN3P20807 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN3P20807 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN3P20807 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN3P20807 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.96■□□□□ 0.47
CAPN3P20807 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
CAPN3P20807 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.96■□□□□ 0.47
CAPN3P20807 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.96■□□□□ 0.47
CAPN3P20807 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.96■□□□□ 0.47
CAPN3P20807 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.96■□□□□ 0.47
CAPN3P20807 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.96■□□□□ 0.47
CAPN3P20807 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.96■□□□□ 0.47
CAPN3P20807 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.96■□□□□ 0.47
CAPN3P20807 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CAPN3P20807 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN3P20807 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CAPN3P20807 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CAPN3P20807 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CAPN3P20807 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CAPN3P20807 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CAPN3P20807 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
CAPN3P20807 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 AC138932.1-201ENST00000534164 6830 ntBASIC17.95■□□□□ 0.46
CAPN3P20807 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CAPN3P20807 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.95■□□□□ 0.46
CAPN3P20807 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.95■□□□□ 0.46
CAPN3P20807 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.95■□□□□ 0.46
CAPN3P20807 AC068587.9-201ENST00000641814 219 ntBASIC17.95■□□□□ 0.46
CAPN3P20807 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.95■□□□□ 0.46
CAPN3P20807 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
CAPN3P20807 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN3P20807 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CAPN3P20807 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN3P20807 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CAPN3P20807 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 FZD10-202ENST00000539839 3282 ntBASIC17.94■□□□□ 0.46
CAPN3P20807 AC135776.1-201ENST00000319817 2481 ntBASIC17.94■□□□□ 0.46
CAPN3P20807 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CAPN3P20807 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CAPN3P20807 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 RPS2P55-201ENST00000397318 883 ntBASIC17.94■□□□□ 0.46
CAPN3P20807 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms