Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.8□□□□□ -0.04
PF4V1P10720 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PF4V1P10720 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PF4V1P10720 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PF4V1P10720 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PF4V1P10720 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PF4V1P10720 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PF4V1P10720 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PF4V1P10720 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PF4V1P10720 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PF4V1P10720 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PF4V1P10720 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PF4V1P10720 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PF4V1P10720 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
PF4V1P10720 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.79□□□□□ -0.04
PF4V1P10720 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.79□□□□□ -0.04
PF4V1P10720 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.79□□□□□ -0.04
PF4V1P10720 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.79□□□□□ -0.04
PF4V1P10720 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 YBX1P2-201ENST00000489612 999 ntBASIC14.79□□□□□ -0.04
PF4V1P10720 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.79□□□□□ -0.04
PF4V1P10720 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.79□□□□□ -0.04
PF4V1P10720 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.79□□□□□ -0.04
PF4V1P10720 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.79□□□□□ -0.04
PF4V1P10720 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.79□□□□□ -0.04
PF4V1P10720 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.79□□□□□ -0.04
PF4V1P10720 AC141257.4-201ENST00000634557 245 ntBASIC14.79□□□□□ -0.04
PF4V1P10720 AC136944.6-201ENST00000634818 245 ntBASIC14.79□□□□□ -0.04
PF4V1P10720 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PF4V1P10720 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PF4V1P10720 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
PF4V1P10720 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.78□□□□□ -0.04
PF4V1P10720 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.78□□□□□ -0.04
PF4V1P10720 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.78□□□□□ -0.04
PF4V1P10720 TSPY5P-201ENST00000426936 936 ntBASIC14.78□□□□□ -0.04
PF4V1P10720 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.78□□□□□ -0.04
PF4V1P10720 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.78□□□□□ -0.04
PF4V1P10720 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.78□□□□□ -0.04
PF4V1P10720 AC091076.1-201ENST00000610741 619 ntBASIC14.78□□□□□ -0.04
PF4V1P10720 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PF4V1P10720 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.78□□□□□ -0.04
PF4V1P10720 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.78□□□□□ -0.04
PF4V1P10720 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.78□□□□□ -0.04
PF4V1P10720 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PF4V1P10720 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PF4V1P10720 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.77□□□□□ -0.04
PF4V1P10720 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PF4V1P10720 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
PF4V1P10720 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PF4V1P10720 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PF4V1P10720 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.77□□□□□ -0.04
PF4V1P10720 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PF4V1P10720 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.77□□□□□ -0.04
PF4V1P10720 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PF4V1P10720 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.77□□□□□ -0.04
PF4V1P10720 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms