Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
TRGV3P03979 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.69□□□□□ -0.06
TRGV3P03979 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.69□□□□□ -0.06
TRGV3P03979 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
TRGV3P03979 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRGV3P03979 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.69□□□□□ -0.06
TRGV3P03979 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.69□□□□□ -0.06
TRGV3P03979 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.69□□□□□ -0.06
TRGV3P03979 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.69□□□□□ -0.06
TRGV3P03979 AL353719.1-201ENST00000566847 864 ntBASIC14.69□□□□□ -0.06
TRGV3P03979 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV3P03979 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.68□□□□□ -0.06
TRGV3P03979 KRT18P22-201ENST00000402024 1347 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.68□□□□□ -0.06
TRGV3P03979 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 RCC2P3-201ENST00000418112 1537 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.68□□□□□ -0.06
TRGV3P03979 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRGV3P03979 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 AP003041.3-201ENST00000527151 707 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.68□□□□□ -0.06
TRGV3P03979 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.68□□□□□ -0.06
TRGV3P03979 AL023803.3-201ENST00000615559 522 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 AC008622.2-201ENST00000617006 1229 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 AC083906.6-201ENST00000641366 219 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TRGV3P03979 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 AC006333.2-201ENST00000607957 2099 ntBASIC14.68□□□□□ -0.06
TRGV3P03979 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.68□□□□□ -0.06
TRGV3P03979 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TRGV3P03979 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
TRGV3P03979 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV3P03979 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.67□□□□□ -0.06
TRGV3P03979 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRGV3P03979 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.67□□□□□ -0.06
TRGV3P03979 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
TRGV3P03979 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.67□□□□□ -0.06
TRGV3P03979 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 AC007663.1-201ENST00000438948 1240 ntBASIC14.67□□□□□ -0.06
TRGV3P03979 MCCD1P1-208ENST00000445732 328 ntBASIC14.67□□□□□ -0.06
TRGV3P03979 ECEL1P2-202ENST00000465689 757 ntBASIC14.67□□□□□ -0.06
TRGV3P03979 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.67□□□□□ -0.06
TRGV3P03979 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
TRGV3P03979 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRGV3P03979 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 AC010653.2-201ENST00000623505 997 ntBASIC14.67□□□□□ -0.06
TRGV3P03979 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.67□□□□□ -0.06
TRGV3P03979 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRGV3P03979 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRGV3P03979 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV3P03979 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRGV3P03979 AC092338.2-201ENST00000568827 1415 ntBASIC14.66□□□□□ -0.06
TRGV3P03979 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRGV3P03979 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV3P03979 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV3P03979 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRGV3P03979 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRGV3P03979 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV3P03979 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV3P03979 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV3P03979 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms