Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-CO1P00395 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MT-CO1P00395 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MT-CO1P00395 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-CO1P00395 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
MT-CO1P00395 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.1■□□□□ 0.65
MT-CO1P00395 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-CO1P00395 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.1■□□□□ 0.65
MT-CO1P00395 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-CO1P00395 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
MT-CO1P00395 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.1■□□□□ 0.65
MT-CO1P00395 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.1■□□□□ 0.65
MT-CO1P00395 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MT-CO1P00395 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MT-CO1P00395 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-CO1P00395 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
MT-CO1P00395 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-CO1P00395 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO1P00395 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-CO1P00395 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 AL109659.2-201ENST00000606809 1674 ntBASIC19.09■□□□□ 0.65
MT-CO1P00395 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MT-CO1P00395 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.09■□□□□ 0.65
MT-CO1P00395 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-CO1P00395 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-CO1P00395 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-CO1P00395 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-CO1P00395 MIR3180-5-201ENST00000583743 153 ntBASIC19.09■□□□□ 0.65
MT-CO1P00395 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-CO1P00395 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.09■□□□□ 0.65
MT-CO1P00395 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MT-CO1P00395 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.09■□□□□ 0.65
MT-CO1P00395 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MT-CO1P00395 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MT-CO1P00395 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-CO1P00395 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-CO1P00395 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.08■□□□□ 0.65
MT-CO1P00395 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
MT-CO1P00395 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
MT-CO1P00395 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.08■□□□□ 0.65
MT-CO1P00395 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-CO1P00395 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
MT-CO1P00395 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.08■□□□□ 0.64
MT-CO1P00395 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.08■□□□□ 0.64
MT-CO1P00395 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MT-CO1P00395 AC022616.7-201ENST00000525383 220 ntBASIC19.08■□□□□ 0.64
MT-CO1P00395 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.08■□□□□ 0.64
MT-CO1P00395 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 AL031432.5-201ENST00000641059 760 ntBASIC19.08■□□□□ 0.64
MT-CO1P00395 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 AC093503.3-201ENST00000624917 2352 ntBASIC19.08■□□□□ 0.64
MT-CO1P00395 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.08■□□□□ 0.64
MT-CO1P00395 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.08■□□□□ 0.64
MT-CO1P00395 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MT-CO1P00395 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
MT-CO1P00395 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MT-CO1P00395 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms