Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.5■□□□□ 0.55
SUPT3HO75486 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.5■□□□□ 0.55
SUPT3HO75486 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
SUPT3HO75486 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SUPT3HO75486 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 KRT16P1-201ENST00000399124 1418 ntBASIC18.49■□□□□ 0.55
SUPT3HO75486 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.49■□□□□ 0.55
SUPT3HO75486 PRSS44-201ENST00000515154 1146 ntBASIC18.49■□□□□ 0.55
SUPT3HO75486 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.49■□□□□ 0.55
SUPT3HO75486 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.49■□□□□ 0.55
SUPT3HO75486 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 CR392000.1-201ENST00000624770 1228 ntBASIC18.49■□□□□ 0.55
SUPT3HO75486 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.49■□□□□ 0.55
SUPT3HO75486 HEIH-201ENST00000623091 1652 ntBASIC18.49■□□□□ 0.55
SUPT3HO75486 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.49■□□□□ 0.55
SUPT3HO75486 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SUPT3HO75486 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.49■□□□□ 0.55
SUPT3HO75486 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT3HO75486 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT3HO75486 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.48■□□□□ 0.55
SUPT3HO75486 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.48■□□□□ 0.55
SUPT3HO75486 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.48■□□□□ 0.55
SUPT3HO75486 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SUPT3HO75486 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.48■□□□□ 0.55
SUPT3HO75486 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.48■□□□□ 0.55
SUPT3HO75486 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SUPT3HO75486 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.48■□□□□ 0.55
SUPT3HO75486 AC004951.3-201ENST00000418645 1148 ntBASIC18.48■□□□□ 0.55
SUPT3HO75486 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.48■□□□□ 0.55
SUPT3HO75486 AC091390.4-202ENST00000476426 537 ntBASIC18.48■□□□□ 0.55
SUPT3HO75486 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 FAM197Y4-202ENST00000622692 608 ntBASIC18.48■□□□□ 0.55
SUPT3HO75486 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.48■□□□□ 0.55
SUPT3HO75486 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SUPT3HO75486 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SUPT3HO75486 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
SUPT3HO75486 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT3HO75486 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
SUPT3HO75486 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.47■□□□□ 0.55
SUPT3HO75486 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SUPT3HO75486 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SUPT3HO75486 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.47■□□□□ 0.55
SUPT3HO75486 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SUPT3HO75486 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SUPT3HO75486 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SUPT3HO75486 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.47■□□□□ 0.55
SUPT3HO75486 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.47■□□□□ 0.55
SUPT3HO75486 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.47■□□□□ 0.55
SUPT3HO75486 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
SUPT3HO75486 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.47■□□□□ 0.55
SUPT3HO75486 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT3HO75486 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUPT3HO75486 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms