Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
VAMP4O75379 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VAMP4O75379 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.82■■□□□ 1.4
VAMP4O75379 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VAMP4O75379 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.82■■□□□ 1.4
VAMP4O75379 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VAMP4O75379 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
VAMP4O75379 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.82■■□□□ 1.4
VAMP4O75379 AL157888.1-201ENST00000631930 593 ntBASIC23.82■■□□□ 1.4
VAMP4O75379 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.82■■□□□ 1.4
VAMP4O75379 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.82■■□□□ 1.4
VAMP4O75379 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.82■■□□□ 1.4
VAMP4O75379 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
VAMP4O75379 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VAMP4O75379 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VAMP4O75379 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
VAMP4O75379 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
VAMP4O75379 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.81■■□□□ 1.4
VAMP4O75379 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
VAMP4O75379 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 STARP1-201ENST00000397973 869 ntBASIC23.81■■□□□ 1.4
VAMP4O75379 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.81■■□□□ 1.4
VAMP4O75379 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 AC022616.7-201ENST00000525383 220 ntBASIC23.81■■□□□ 1.4
VAMP4O75379 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 HYMAI.1-201ENST00000620949 238 ntBASIC23.81■■□□□ 1.4
VAMP4O75379 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
VAMP4O75379 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
VAMP4O75379 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.81■■□□□ 1.4
VAMP4O75379 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VAMP4O75379 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.81■■□□□ 1.4
VAMP4O75379 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
VAMP4O75379 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.8■■□□□ 1.4
VAMP4O75379 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.8■■□□□ 1.4
VAMP4O75379 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.8■■□□□ 1.4
VAMP4O75379 RASA4DP-201ENST00000460726 1199 ntBASIC23.8■■□□□ 1.4
VAMP4O75379 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 AL049597.2-201ENST00000565575 961 ntBASIC23.8■■□□□ 1.4
VAMP4O75379 MIR3180-4-201ENST00000582223 153 ntBASIC23.8■■□□□ 1.4
VAMP4O75379 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.8■■□□□ 1.4
VAMP4O75379 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
VAMP4O75379 AC079602.3-201ENST00000623931 403 ntBASIC23.8■■□□□ 1.4
VAMP4O75379 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
VAMP4O75379 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.8■■□□□ 1.4
VAMP4O75379 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VAMP4O75379 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.79■■□□□ 1.4
VAMP4O75379 AC099343.3-201ENST00000605834 2503 ntBASIC23.79■■□□□ 1.4
VAMP4O75379 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
VAMP4O75379 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.79■■□□□ 1.4
VAMP4O75379 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.79■■□□□ 1.4
VAMP4O75379 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.79■■□□□ 1.4
VAMP4O75379 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
VAMP4O75379 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VAMP4O75379 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
VAMP4O75379 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.78■■□□□ 1.4
VAMP4O75379 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
VAMP4O75379 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
VAMP4O75379 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.78■■□□□ 1.4
VAMP4O75379 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.78■■□□□ 1.4
VAMP4O75379 HOMER2P1-201ENST00000455653 964 ntBASIC23.78■■□□□ 1.4
VAMP4O75379 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.78■■□□□ 1.4
VAMP4O75379 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
VAMP4O75379 MYC-208ENST00000641036 567 ntBASIC23.78■■□□□ 1.4
VAMP4O75379 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.78■■□□□ 1.4
VAMP4O75379 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
VAMP4O75379 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
VAMP4O75379 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.78■■□□□ 1.4
VAMP4O75379 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.78■■□□□ 1.4
VAMP4O75379 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.77■■□□□ 1.4
VAMP4O75379 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VAMP4O75379 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms