Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
OPHN1O60890 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.45■□□□□ 0.7
OPHN1O60890 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.45■□□□□ 0.7
OPHN1O60890 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.45■□□□□ 0.7
OPHN1O60890 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
OPHN1O60890 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.45■□□□□ 0.7
OPHN1O60890 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.45■□□□□ 0.7
OPHN1O60890 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.45■□□□□ 0.7
OPHN1O60890 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.45■□□□□ 0.7
OPHN1O60890 AC131212.4-201ENST00000623606 975 ntBASIC19.45■□□□□ 0.7
OPHN1O60890 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
OPHN1O60890 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
OPHN1O60890 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.45■□□□□ 0.7
OPHN1O60890 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.45■□□□□ 0.7
OPHN1O60890 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPHN1O60890 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.44■□□□□ 0.7
OPHN1O60890 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
OPHN1O60890 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.44■□□□□ 0.7
OPHN1O60890 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
OPHN1O60890 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.44■□□□□ 0.7
OPHN1O60890 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
OPHN1O60890 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
OPHN1O60890 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 ECEL1P2-202ENST00000465689 757 ntBASIC19.44■□□□□ 0.7
OPHN1O60890 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
OPHN1O60890 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.44■□□□□ 0.7
OPHN1O60890 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.44■□□□□ 0.7
OPHN1O60890 AC026271.3-201ENST00000571884 352 ntBASIC19.44■□□□□ 0.7
OPHN1O60890 AC091076.1-201ENST00000610741 619 ntBASIC19.44■□□□□ 0.7
OPHN1O60890 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
OPHN1O60890 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.44■□□□□ 0.7
OPHN1O60890 AL031598.1-201ENST00000561511 1773 ntBASIC19.44■□□□□ 0.7
OPHN1O60890 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.44■□□□□ 0.7
OPHN1O60890 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPHN1O60890 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.43■□□□□ 0.7
OPHN1O60890 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
OPHN1O60890 NEFHP1-201ENST00000412845 2629 ntBASIC19.43■□□□□ 0.7
OPHN1O60890 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.43■□□□□ 0.7
OPHN1O60890 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 AK4P3-201ENST00000418260 669 ntBASIC19.43■□□□□ 0.7
OPHN1O60890 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
OPHN1O60890 UPK3BP1-201ENST00000428678 509 ntBASIC19.43■□□□□ 0.7
OPHN1O60890 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.43■□□□□ 0.7
OPHN1O60890 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.43■□□□□ 0.7
OPHN1O60890 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 AP005242.2-201ENST00000580065 1175 ntBASIC19.43■□□□□ 0.7
OPHN1O60890 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.43■□□□□ 0.7
OPHN1O60890 DGCR10-201ENST00000609839 495 ntBASIC19.43■□□□□ 0.7
OPHN1O60890 AC083906.6-201ENST00000641366 219 ntBASIC19.43■□□□□ 0.7
OPHN1O60890 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
OPHN1O60890 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPHN1O60890 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms