Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SSNA1O43805 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SSNA1O43805 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SSNA1O43805 FLJ16779-201ENST00000612722 7638 ntBASIC15.91■□□□□ 0.14
SSNA1O43805 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.91■□□□□ 0.14
SSNA1O43805 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.91■□□□□ 0.14
SSNA1O43805 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.91■□□□□ 0.14
SSNA1O43805 CCDC92B-201ENST00000575506 885 ntBASIC15.91■□□□□ 0.14
SSNA1O43805 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.91■□□□□ 0.14
SSNA1O43805 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
SSNA1O43805 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.91■□□□□ 0.14
SSNA1O43805 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.91■□□□□ 0.14
SSNA1O43805 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.91■□□□□ 0.14
SSNA1O43805 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SSNA1O43805 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSNA1O43805 CYP21A1P-202ENST00000354927 1481 ntBASIC15.91■□□□□ 0.14
SSNA1O43805 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SSNA1O43805 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 AC063926.3-201ENST00000624734 5658 ntBASIC15.9■□□□□ 0.14
SSNA1O43805 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.9■□□□□ 0.14
SSNA1O43805 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.9■□□□□ 0.14
SSNA1O43805 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.9■□□□□ 0.14
SSNA1O43805 AC138028.4-201ENST00000564984 1845 ntBASIC15.9■□□□□ 0.14
SSNA1O43805 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 MIR572-201ENST00000384983 95 ntBASIC15.9■□□□□ 0.14
SSNA1O43805 TPRG1LP1-201ENST00000598702 760 ntBASIC15.9■□□□□ 0.14
SSNA1O43805 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SSNA1O43805 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SSNA1O43805 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 AC018553.1-201ENST00000616682 1458 ntBASIC15.9■□□□□ 0.14
SSNA1O43805 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SSNA1O43805 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSNA1O43805 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 NKILA-202ENST00000614771 2598 ntBASIC15.89■□□□□ 0.13
SSNA1O43805 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 AC011676.5-201ENST00000624864 2660 ntBASIC15.89■□□□□ 0.13
SSNA1O43805 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.89■□□□□ 0.13
SSNA1O43805 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
SSNA1O43805 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSNA1O43805 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.89■□□□□ 0.13
SSNA1O43805 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSNA1O43805 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.89■□□□□ 0.13
SSNA1O43805 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSNA1O43805 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms