Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
O00370 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.88■□□□□ 0.77
O00370 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
O00370 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
O00370 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
O00370 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
O00370 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.88■□□□□ 0.77
O00370 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.88■□□□□ 0.77
O00370 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.88■□□□□ 0.77
O00370 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
O00370 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
O00370 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.87■□□□□ 0.77
O00370 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 WIZP1-201ENST00000531444 2299 ntBASIC19.87■□□□□ 0.77
O00370 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.87■□□□□ 0.77
O00370 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.87■□□□□ 0.77
O00370 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.87■□□□□ 0.77
O00370 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 HMGA1P5-201ENST00000412453 271 ntBASIC19.87■□□□□ 0.77
O00370 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
O00370 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.87■□□□□ 0.77
O00370 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
O00370 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
O00370 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.87■□□□□ 0.77
O00370 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
O00370 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
O00370 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
O00370 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 KRT8P45-201ENST00000414328 1447 ntBASIC19.86■□□□□ 0.77
O00370 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
O00370 AL357033.4-201ENST00000617703 1807 ntBASIC19.86■□□□□ 0.77
O00370 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
O00370 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.86■□□□□ 0.77
O00370 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.86■□□□□ 0.77
O00370 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.86■□□□□ 0.77
O00370 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.86■□□□□ 0.77
O00370 MIR3180-5-201ENST00000583743 153 ntBASIC19.86■□□□□ 0.77
O00370 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 CR769767.2-201ENST00000622735 460 ntBASIC19.86■□□□□ 0.77
O00370 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.86■□□□□ 0.77
O00370 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
O00370 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.86■□□□□ 0.77
O00370 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.86■□□□□ 0.77
O00370 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
O00370 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.86■□□□□ 0.77
O00370 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
O00370 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
O00370 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.85■□□□□ 0.77
O00370 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.85■□□□□ 0.77
O00370 SLC25A3P1-201ENST00000443844 931 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms