Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3BA6NDS4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 RNF126P1-202ENST00000569893 925 ntBASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 AL032819.2-201ENST00000624543 2162 ntBASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.93■□□□□ 0.62
TBC1D3BA6NDS4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 AC007952.6-201ENST00000573168 2673 ntBASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 AC003957.1-201ENST00000625108 2673 ntBASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3BA6NDS4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 PVRIG2P-201ENST00000435460 978 ntBASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 AP003733.1-201ENST00000491725 852 ntBASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 MIR3180-4-201ENST00000582223 153 ntBASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TBC1D3BA6NDS4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms