Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 AL023284.2-201ENST00000405850 579 ntBASIC21.19■□□□□ 0.98
VWA3AA6NCI4 CA15P1-201ENST00000481698 905 ntBASIC21.19■□□□□ 0.98
VWA3AA6NCI4 AC093827.2-201ENST00000512654 315 ntBASIC21.19■□□□□ 0.98
VWA3AA6NCI4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 AC090164.3-201ENST00000610780 2143 ntBASIC21.19■□□□□ 0.98
VWA3AA6NCI4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.19■□□□□ 0.98
VWA3AA6NCI4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 FITM1-202ENST00000559294 800 ntBASIC21.18■□□□□ 0.98
VWA3AA6NCI4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 AC066615.1-201ENST00000640911 628 ntBASIC21.18■□□□□ 0.98
VWA3AA6NCI4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 AL109659.2-201ENST00000606809 1674 ntBASIC21.18■□□□□ 0.98
VWA3AA6NCI4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VWA3AA6NCI4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VWA3AA6NCI4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 AL596275.1-201ENST00000423464 877 ntBASIC21.16■□□□□ 0.98
VWA3AA6NCI4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VWA3AA6NCI4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms