Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 AC239809.2-201ENST00000415381 517 ntBASIC18.67■□□□□ 0.58
CCDC189A1A4V9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 AL512353.2-201ENST00000448759 1962 ntBASIC18.67■□□□□ 0.58
CCDC189A1A4V9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 LINC01126-201ENST00000623515 1646 ntBASIC18.67■□□□□ 0.58
CCDC189A1A4V9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 AL353708.3-201ENST00000610272 989 ntBASIC18.66■□□□□ 0.58
CCDC189A1A4V9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 WIZP1-201ENST00000531444 2299 ntBASIC18.66■□□□□ 0.58
CCDC189A1A4V9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC189A1A4V9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 HCG11-201ENST00000411553 5696 ntBASIC18.65■□□□□ 0.58
CCDC189A1A4V9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 AC067852.2-201ENST00000590513 2313 ntBASIC18.65■□□□□ 0.58
CCDC189A1A4V9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC189A1A4V9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC189A1A4V9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC189A1A4V9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC189A1A4V9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 POU5F1P3-201ENST00000428824 1078 ntBASIC18.64■□□□□ 0.57
CCDC189A1A4V9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 Z85996.1-201ENST00000494644 937 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms