Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 UBQLN4P1-201ENST00000461599 1801 ntBASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 KRT17P3-201ENST00000420566 1262 ntBASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC026366.1-201ENST00000488803 879 ntBASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF103-CHMP3A0A140T963 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC233263.1-201ENST00000578059 224 ntBASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 MTDHP1-201ENST00000605323 784 ntBASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF103-CHMP3A0A140T963 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC067852.2-201ENST00000590513 2313 ntBASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 HLA-A-209ENST00000638375 975 ntBASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms