Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 HBZP1-201ENST00000354915 429 ntBASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 FP475955.4-201ENST00000623131 1990 ntBASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV10A0A0B4J240 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 AL645929.1-201ENST00000420084 975 ntBASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 HYMAI.1-201ENST00000620949 238 ntBASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 IRX1P1-201ENST00000438849 1838 ntBASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 AC141586.3-201ENST00000562166 1838 ntBASIC13.16□□□□□ -0.3
TRAV10A0A0B4J240 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 SEC1P-202ENST00000473944 940 ntBASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 KRT18P56-201ENST00000507275 550 ntBASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV10A0A0B4J240 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms