Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.5■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MIR564-202ENST00000385049 94 ntBASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC099343.3-201ENST00000605834 2503 ntBASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KRT17P2-201ENST00000300992 1314 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AIRN-201ENST00000601203 4374 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 INGX-201ENST00000359239 846 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC093827.2-201ENST00000512654 315 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AP003041.3-201ENST00000527151 707 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC066615.1-201ENST00000640911 628 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CYP2D8P-201ENST00000433633 1490 ntBASIC16.48■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC036111.1-201ENST00000533973 1582 ntBASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC112777.1-201ENST00000540175 1423 ntBASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL353719.1-201ENST00000566847 864 ntBASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL354751.1-201ENST00000412768 1863 ntBASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms