Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AC233702.3-201ENST00000578656 1387 ntBASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 SLC25A24-204ENST00000569674 2357 ntBASIC24.38■■□□□ 1.49
SPG7Q9UQ90 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 AC104692.2-201ENST00000603054 253 ntBASIC24.38■■□□□ 1.49
SPG7Q9UQ90 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPG7Q9UQ90 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 AC009078.2-202ENST00000463353 338 ntBASIC24.37■■□□□ 1.49
SPG7Q9UQ90 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SPG7Q9UQ90 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 AL160237.2-201ENST00000556165 472 ntBASIC24.36■■□□□ 1.49
SPG7Q9UQ90 AC009065.1-201ENST00000564055 1225 ntBASIC24.36■■□□□ 1.49
SPG7Q9UQ90 Z69720.1-201ENST00000601483 472 ntBASIC24.36■■□□□ 1.49
SPG7Q9UQ90 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG7Q9UQ90 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 LINC00167-201ENST00000530583 1419 ntBASIC24.35■■□□□ 1.49
SPG7Q9UQ90 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 GUSBP12-201ENST00000513727 720 ntBASIC24.35■■□□□ 1.49
SPG7Q9UQ90 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 AC138894.3-201ENST00000603787 634 ntBASIC24.35■■□□□ 1.49
SPG7Q9UQ90 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG7Q9UQ90 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 AC079781.3-201ENST00000449110 356 ntBASIC24.34■■□□□ 1.49
SPG7Q9UQ90 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms