Protein–RNA interactions for Protein: Q9UHI6

DDX20, Probable ATP-dependent RNA helicase DDX20, humanhuman

Known RBP Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20Q9UHI6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 AL121912.1-201ENST00000603683 238 ntBASIC21.1■□□□□ 0.97
DDX20Q9UHI6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX20Q9UHI6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 MRPL3P1-201ENST00000400109 1033 ntBASIC21.09■□□□□ 0.97
DDX20Q9UHI6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 AC090616.6-201ENST00000582640 721 ntBASIC21.09■□□□□ 0.97
DDX20Q9UHI6 AC138894.3-201ENST00000603787 634 ntBASIC21.09■□□□□ 0.97
DDX20Q9UHI6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
DDX20Q9UHI6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 AC074051.2-201ENST00000565115 352 ntBASIC21.08■□□□□ 0.97
DDX20Q9UHI6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX20Q9UHI6 AC005332.3-201ENST00000589904 676 ntBASIC21.08■□□□□ 0.97
DDX20Q9UHI6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX20Q9UHI6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX20Q9UHI6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.08■□□□□ 0.96
DDX20Q9UHI6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDX20Q9UHI6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX20Q9UHI6 AL162377.1-201ENST00000618844 1793 ntBASIC21.08■□□□□ 0.96
DDX20Q9UHI6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 KRT16P4-201ENST00000453883 522 ntBASIC21.07■□□□□ 0.96
DDX20Q9UHI6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 AL353801.3-201ENST00000609898 542 ntBASIC21.07■□□□□ 0.96
DDX20Q9UHI6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms