Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 AP005242.2-201ENST00000580065 1175 ntBASIC19.04■□□□□ 0.64
UBP1Q9NZI7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 AC008556.1-201ENST00000610908 2040 ntBASIC19.04■□□□□ 0.64
UBP1Q9NZI7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 AL357033.4-201ENST00000617703 1807 ntBASIC19.04■□□□□ 0.64
UBP1Q9NZI7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBP1Q9NZI7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 AC126763.1-201ENST00000552015 2118 ntBASIC19.03■□□□□ 0.64
UBP1Q9NZI7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.03■□□□□ 0.64
UBP1Q9NZI7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 FITM1-202ENST00000559294 800 ntBASIC19.03■□□□□ 0.64
UBP1Q9NZI7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.03■□□□□ 0.64
UBP1Q9NZI7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBP1Q9NZI7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 KRT8P9-201ENST00000558927 1449 ntBASIC19.02■□□□□ 0.64
UBP1Q9NZI7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBP1Q9NZI7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBP1Q9NZI7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.02■□□□□ 0.63
UBP1Q9NZI7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
UBP1Q9NZI7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBP1Q9NZI7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 AL023284.2-201ENST00000405850 579 ntBASIC19.01■□□□□ 0.63
UBP1Q9NZI7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBP1Q9NZI7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBP1Q9NZI7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms