Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.47■□□□□ 0.07
CALYQ9NYX4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 AC005082.1-201ENST00000413042 2259 ntBASIC15.47■□□□□ 0.07
CALYQ9NYX4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 AL357033.4-201ENST00000617703 1807 ntBASIC15.47■□□□□ 0.07
CALYQ9NYX4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.47■□□□□ 0.07
CALYQ9NYX4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CALYQ9NYX4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 KRT17P2-201ENST00000300992 1314 ntBASIC15.46■□□□□ 0.07
CALYQ9NYX4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AC090164.3-201ENST00000610780 2143 ntBASIC15.46■□□□□ 0.07
CALYQ9NYX4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AC008622.2-201ENST00000617006 1229 ntBASIC15.46■□□□□ 0.07
CALYQ9NYX4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AL109659.2-201ENST00000606809 1674 ntBASIC15.46■□□□□ 0.07
CALYQ9NYX4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.46■□□□□ 0.07
CALYQ9NYX4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CALYQ9NYX4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CALYQ9NYX4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CALYQ9NYX4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CALYQ9NYX4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CALYQ9NYX4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 AC104581.1-202ENST00000635932 2618 ntBASIC15.45■□□□□ 0.06
CALYQ9NYX4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 AL023284.2-201ENST00000405850 579 ntBASIC15.45■□□□□ 0.06
CALYQ9NYX4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 MCCD1P1-208ENST00000445732 328 ntBASIC15.45■□□□□ 0.06
CALYQ9NYX4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 AP000525.1-201ENST00000608286 694 ntBASIC15.45■□□□□ 0.06
CALYQ9NYX4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 MYC-208ENST00000641036 567 ntBASIC15.45■□□□□ 0.06
CALYQ9NYX4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CALYQ9NYX4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CALYQ9NYX4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CALYQ9NYX4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CALYQ9NYX4 AC009113.1-201ENST00000570267 2443 ntBASIC15.44■□□□□ 0.06
CALYQ9NYX4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CALYQ9NYX4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CALYQ9NYX4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CALYQ9NYX4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms