Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AC112777.1-201ENST00000540175 1423 ntBASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 WIZP1-201ENST00000531444 2299 ntBASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN4Q9NRR5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 KRT8P45-201ENST00000414328 1447 ntBASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 AC034236.2-201ENST00000606662 1610 ntBASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 WWOX-216ENST00000569818 525 ntBASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 LINC01568-207ENST00000641790 1380 ntBASIC17.15■□□□□ 0.34
UBQLN4Q9NRR5 BCL2-203ENST00000589955 5011 ntBASIC17.14■□□□□ 0.34
UBQLN4Q9NRR5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 AC087499.1-201ENST00000418141 1075 ntBASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 KRT18P41-201ENST00000518924 1277 ntBASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 AL512604.3-201ENST00000569583 964 ntBASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms