Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 AP000692.2-201ENST00000608391 879 ntBASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
NEUROD4Q9HD90 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
NEUROD4Q9HD90 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NEUROD4Q9HD90 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 AC008040.2-201ENST00000461049 708 ntBASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 AC011506.1-201ENST00000474329 610 ntBASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 Z99916.2-201ENST00000604037 246 ntBASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 CD177P1-201ENST00000606252 935 ntBASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 AC096733.2-201ENST00000609937 1394 ntBASIC17.64■□□□□ 0.41
NEUROD4Q9HD90 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 FAM197Y1-201ENST00000421178 764 ntBASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 AP001412.1-201ENST00000608405 714 ntBASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
NEUROD4Q9HD90 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 RCC2P3-201ENST00000418112 1537 ntBASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 BICD1-207ENST00000551848 1962 ntBASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms