Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 CA15P1-201ENST00000481698 905 ntBASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 AL359075.1-203ENST00000462729 1002 ntBASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR1BQ9H9Y6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 TMEM179-206ENST00000616017 1645 ntBASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 DUSP5P1-201ENST00000441325 1139 ntBASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
POLR1BQ9H9Y6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
POLR1BQ9H9Y6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
POLR1BQ9H9Y6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.46■□□□□ 0.54
POLR1BQ9H9Y6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AL138781.2-201ENST00000617896 1843 ntBASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AL450487.1-201ENST00000426799 995 ntBASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR1BQ9H9Y6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms