Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 CA15P1-201ENST00000481698 905 ntBASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 AL109659.2-201ENST00000606809 1674 ntBASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AP003071.4-201ENST00000562276 1284 ntBASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AC008622.2-201ENST00000617006 1229 ntBASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AC112777.1-201ENST00000540175 1423 ntBASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 BICD1-207ENST00000551848 1962 ntBASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AC126763.1-201ENST00000552015 2118 ntBASIC18.97■□□□□ 0.63
LRRC40Q9H9A6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 CRYGFP-201ENST00000418459 633 ntBASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
LRRC40Q9H9A6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 AL499627.1-201ENST00000569373 2188 ntBASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 AL390961.4-201ENST00000623958 2535 ntBASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 KRT8P45-201ENST00000414328 1447 ntBASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 AP005242.2-201ENST00000580065 1175 ntBASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 MIR4785-201ENST00000585005 73 ntBASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms