Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
VGLL1Q99990 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.19□□□□□ -0.14
VGLL1Q99990 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 ABALON-201ENST00000629058 1903 ntBASIC14.19□□□□□ -0.14
VGLL1Q99990 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.19□□□□□ -0.14
VGLL1Q99990 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.18□□□□□ -0.14
VGLL1Q99990 NBPF21P-201ENST00000425093 1451 ntBASIC14.18□□□□□ -0.14
VGLL1Q99990 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
VGLL1Q99990 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
VGLL1Q99990 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 NOC2LP2-201ENST00000407594 1944 ntBASIC14.18□□□□□ -0.14
VGLL1Q99990 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VGLL1Q99990 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.18□□□□□ -0.14
VGLL1Q99990 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.18□□□□□ -0.14
VGLL1Q99990 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VGLL1Q99990 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.18□□□□□ -0.14
VGLL1Q99990 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.18□□□□□ -0.14
VGLL1Q99990 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.18□□□□□ -0.14
VGLL1Q99990 AC133041.1-202ENST00000642053 222 ntBASIC14.18□□□□□ -0.14
VGLL1Q99990 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 AP000997.3-201ENST00000623333 2250 ntBASIC14.18□□□□□ -0.14
VGLL1Q99990 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.18□□□□□ -0.14
VGLL1Q99990 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VGLL1Q99990 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
VGLL1Q99990 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VGLL1Q99990 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VGLL1Q99990 AC073592.3-201ENST00000625118 1834 ntBASIC14.18□□□□□ -0.14
VGLL1Q99990 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VGLL1Q99990 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 AC068880.1-201ENST00000507289 2297 ntBASIC14.17□□□□□ -0.14
VGLL1Q99990 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VGLL1Q99990 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
VGLL1Q99990 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VGLL1Q99990 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.17□□□□□ -0.14
VGLL1Q99990 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.17□□□□□ -0.14
VGLL1Q99990 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.17□□□□□ -0.14
VGLL1Q99990 POM121L13P-201ENST00000422362 380 ntBASIC14.17□□□□□ -0.14
VGLL1Q99990 AC069152.1-201ENST00000438030 544 ntBASIC14.17□□□□□ -0.14
VGLL1Q99990 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.17□□□□□ -0.14
VGLL1Q99990 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 C1QL1P1-201ENST00000568105 661 ntBASIC14.17□□□□□ -0.14
VGLL1Q99990 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.17□□□□□ -0.14
VGLL1Q99990 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 AL109923.1-201ENST00000618799 583 ntBASIC14.17□□□□□ -0.14
VGLL1Q99990 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VGLL1Q99990 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VGLL1Q99990 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VGLL1Q99990 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms