Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NSMCE2Q96MF7 AC134043.2-201ENST00000624206 2238 ntBASIC17.64■□□□□ 0.42
NSMCE2Q96MF7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 AL160286.2-201ENST00000567150 934 ntBASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 MYC-208ENST00000641036 567 ntBASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 RCC2P6-201ENST00000526625 1557 ntBASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 AC092368.3-202ENST00000574180 1591 ntBASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.64■□□□□ 0.41
NSMCE2Q96MF7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 LINC00896-202ENST00000609602 2128 ntBASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.63■□□□□ 0.41
NSMCE2Q96MF7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 MIPEPP3-201ENST00000412105 444 ntBASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 AL050303.2-201ENST00000619798 666 ntBASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.62■□□□□ 0.41
NSMCE2Q96MF7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms