Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 AC005521.1-201ENST00000393351 872 ntBASIC19.24■□□□□ 0.67
IFT43Q96FT9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 AC008040.2-201ENST00000461049 708 ntBASIC19.24■□□□□ 0.67
IFT43Q96FT9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 EGLN1P1-201ENST00000531623 762 ntBASIC19.24■□□□□ 0.67
IFT43Q96FT9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 AL590326.2-201ENST00000625139 305 ntBASIC19.24■□□□□ 0.67
IFT43Q96FT9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 TSPY14P-201ENST00000303979 915 ntBASIC19.23■□□□□ 0.67
IFT43Q96FT9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.23■□□□□ 0.67
IFT43Q96FT9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFT43Q96FT9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 AL137013.1-201ENST00000432946 1228 ntBASIC19.22■□□□□ 0.67
IFT43Q96FT9 SLC25A3P1-201ENST00000443844 931 ntBASIC19.22■□□□□ 0.67
IFT43Q96FT9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFT43Q96FT9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.22■□□□□ 0.67
IFT43Q96FT9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
IFT43Q96FT9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFT43Q96FT9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms