Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SLC47A1Q96FL8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC47A1Q96FL8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 RNA5SP413-201ENST00000516373 109 ntBASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SLC47A1Q96FL8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms