Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX1Q92499 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX1Q92499 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 FITM1-202ENST00000559294 800 ntBASIC19.9■□□□□ 0.78
DDX1Q92499 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX1Q92499 AP000525.1-201ENST00000608286 694 ntBASIC19.9■□□□□ 0.78
DDX1Q92499 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
DDX1Q92499 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX1Q92499 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX1Q92499 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX1Q92499 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
DDX1Q92499 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX1Q92499 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
DDX1Q92499 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DDX1Q92499 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
DDX1Q92499 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX1Q92499 BICD1-207ENST00000551848 1962 ntBASIC19.89■□□□□ 0.77
DDX1Q92499 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX1Q92499 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX1Q92499 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.89■□□□□ 0.77
DDX1Q92499 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX1Q92499 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
DDX1Q92499 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX1Q92499 AC135050.7-201ENST00000624508 2218 ntBASIC19.88■□□□□ 0.77
DDX1Q92499 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 AC073508.3-201ENST00000619697 1419 ntBASIC19.88■□□□□ 0.77
DDX1Q92499 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX1Q92499 MIR564-202ENST00000385049 94 ntBASIC19.88■□□□□ 0.77
DDX1Q92499 AL390955.1-201ENST00000428694 934 ntBASIC19.88■□□□□ 0.77
DDX1Q92499 KRT18P41-201ENST00000518924 1277 ntBASIC19.88■□□□□ 0.77
DDX1Q92499 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX1Q92499 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
DDX1Q92499 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.88■□□□□ 0.77
DDX1Q92499 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX1Q92499 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDX1Q92499 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX1Q92499 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX1Q92499 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX1Q92499 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX1Q92499 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.87■□□□□ 0.77
DDX1Q92499 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 UPK3BP1-201ENST00000428678 509 ntBASIC19.87■□□□□ 0.77
DDX1Q92499 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.87■□□□□ 0.77
DDX1Q92499 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.87■□□□□ 0.77
DDX1Q92499 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX1Q92499 LINC01238-205ENST00000567549 1107 ntBASIC19.87■□□□□ 0.77
DDX1Q92499 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX1Q92499 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX1Q92499 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDX1Q92499 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX1Q92499 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX1Q92499 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms