Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 AL162741.1-201ENST00000565563 1558 ntBASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCHCR1Q8TD31 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 AC008550.1-201ENST00000511500 884 ntBASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 HLA-A-209ENST00000638375 975 ntBASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 AC018470.1-201ENST00000624790 3129 ntBASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCHCR1Q8TD31 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 AF186192.3-201ENST00000583427 947 ntBASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 AL353708.3-201ENST00000610272 989 ntBASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCHCR1Q8TD31 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 ABALON-201ENST00000629058 1903 ntBASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 RPS2P55-201ENST00000397318 883 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms