Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 MCCD1P1-208ENST00000445732 328 ntBASIC16.78■□□□□ 0.28
CHD6Q8TD26 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD6Q8TD26 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHD6Q8TD26 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 HILS1-202ENST00000545329 423 ntBASIC16.77■□□□□ 0.28
CHD6Q8TD26 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHD6Q8TD26 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD6Q8TD26 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.77■□□□□ 0.28
CHD6Q8TD26 AL589182.2-201ENST00000619332 1049 ntBASIC16.77■□□□□ 0.28
CHD6Q8TD26 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHD6Q8TD26 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD6Q8TD26 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD6Q8TD26 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD6Q8TD26 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD6Q8TD26 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD6Q8TD26 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHD6Q8TD26 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 MTDHP4-201ENST00000600287 670 ntBASIC16.76■□□□□ 0.27
CHD6Q8TD26 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 MIR1909-201ENST00000411312 80 ntBASIC16.76■□□□□ 0.27
CHD6Q8TD26 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD6Q8TD26 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD6Q8TD26 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 LINC02560-201ENST00000596379 459 ntBASIC16.75■□□□□ 0.27
CHD6Q8TD26 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 AC068587.10-201ENST00000641210 219 ntBASIC16.75■□□□□ 0.27
CHD6Q8TD26 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 RN7SL692P-201ENST00000464677 288 ntBASIC16.75■□□□□ 0.27
CHD6Q8TD26 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 SPDYE22P-201ENST00000582158 798 ntBASIC16.75■□□□□ 0.27
CHD6Q8TD26 AP000867.4-201ENST00000641616 219 ntBASIC16.75■□□□□ 0.27
CHD6Q8TD26 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHD6Q8TD26 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.75■□□□□ 0.27
CHD6Q8TD26 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 DPP3P2-201ENST00000416030 1696 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms