Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 MIR4758-201ENST00000577688 71 ntBASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM42Q8IWZ5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 AC133041.1-202ENST00000642053 222 ntBASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM42Q8IWZ5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 AC069152.1-201ENST00000438030 544 ntBASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM42Q8IWZ5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms