Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 AC130371.2-201ENST00000619443 611 ntBASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 AC068587.9-201ENST00000641814 219 ntBASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 AC018470.1-201ENST00000624790 3129 ntBASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 KRT8P3-201ENST00000519669 1449 ntBASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 CKBP1-201ENST00000565489 1086 ntBASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 CD177P1-201ENST00000606252 935 ntBASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00346Q8IVM7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 KRT8P32-201ENST00000512863 1461 ntBASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00346Q8IVM7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms