Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB43Q86YS6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 AL023973.1-201ENST00000624619 620 ntBASIC17.83■□□□□ 0.44
RAB43Q86YS6 MYC-208ENST00000641036 567 ntBASIC17.83■□□□□ 0.44
RAB43Q86YS6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB43Q86YS6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB43Q86YS6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 AC005332.7-201ENST00000614046 2005 ntBASIC17.82■□□□□ 0.44
RAB43Q86YS6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB43Q86YS6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RAB43Q86YS6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AC005332.8-201ENST00000622750 2735 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AC007613.1-201ENST00000572811 2597 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AL031133.1-201ENST00000406807 723 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 UPK3BP1-201ENST00000428678 509 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AL358472.4-201ENST00000633140 710 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 ZNF815P-204ENST00000434898 1737 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 KRT8P45-201ENST00000414328 1447 ntBASIC17.81■□□□□ 0.44
RAB43Q86YS6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB43Q86YS6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RAB43Q86YS6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms