Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF549Q6P9A3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
ZNF549Q6P9A3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 AC008556.1-201ENST00000610908 2040 ntBASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 AC073592.3-201ENST00000625118 1834 ntBASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CRYGFP-201ENST00000418459 633 ntBASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF549Q6P9A3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 AC135050.7-201ENST00000624508 2218 ntBASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 RBM17P1-201ENST00000453646 1190 ntBASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 GPAT2P1-201ENST00000444924 1672 ntBASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 AL109659.2-201ENST00000606809 1674 ntBASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF549Q6P9A3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms