Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL54Q6P161 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MRPL54Q6P161 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.14□□□□□ -0.15
MRPL54Q6P161 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
MRPL54Q6P161 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.14□□□□□ -0.15
MRPL54Q6P161 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MRPL54Q6P161 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.14□□□□□ -0.15
MRPL54Q6P161 AD000864.1-201ENST00000624076 2295 ntBASIC14.13□□□□□ -0.15
MRPL54Q6P161 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 IRS3P-201ENST00000223076 1006 ntBASIC14.13□□□□□ -0.15
MRPL54Q6P161 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 AL354811.1-201ENST00000610286 706 ntBASIC14.13□□□□□ -0.15
MRPL54Q6P161 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MRPL54Q6P161 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 AC135279.3-201ENST00000610945 1311 ntBASIC14.13□□□□□ -0.15
MRPL54Q6P161 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.13□□□□□ -0.15
MRPL54Q6P161 FEM1AP3-201ENST00000403722 1741 ntBASIC14.12□□□□□ -0.15
MRPL54Q6P161 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MRPL54Q6P161 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
MRPL54Q6P161 AC104417.2-201ENST00000562989 1793 ntBASIC14.11□□□□□ -0.15
MRPL54Q6P161 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms