Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 AC099343.3-201ENST00000605834 2503 ntBASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
FAM53AQ6NSI3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 RPS2P55-201ENST00000397318 883 ntBASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 FAM207BP-201ENST00000447172 505 ntBASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 AC107956.1-201ENST00000494359 873 ntBASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 AC068587.9-201ENST00000641814 219 ntBASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM53AQ6NSI3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 PRSS44-201ENST00000515154 1146 ntBASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 CKBP1-201ENST00000565489 1086 ntBASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM53AQ6NSI3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 AL133373.2-201ENST00000623187 2828 ntBASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 UBE2SP1-201ENST00000450587 669 ntBASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM53AQ6NSI3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms